rectal chlamydia

Can Chlamydia Affect Bowel Movements? A chlamydia infection in the rectum may cause discharge from the anus, rectal pain, mucous with stools, painful bowel movements and redness in the anal area. For men, symptoms can include: Clear or mucous-like fluid from the penis. Can chlamydia cause watery diarrhea? With rectal chlamydia, symptoms include itching, watery